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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915986.1_cds_XP_016465677.1_58612
CDS Infomation

[gene=LOC107788516] [db_xref=GeneID:107788516] [protein=F-box-like/WD repeat-containing protein TBL1X] [protein_id=XP_016465677.1] [location=complement(join(67119..67338,67782..67856,68867..68940,69065..69118,69799..69873,70560..70678,72672..72735,72855..73005,73804..73850,73966..74060,74191..74560,74654..74799,78644..78704))] [gbkey=CDS]
Sequence

ATGATTTCTATTACCTCATCGGAGCTTAACTACCTCGTTTTCCGGTACCTTCAAGAATCA
GGGTTTACGCATTCAGCATTTGCTTTAGGATATGAGGCGGGGATTAATAAGAGCACAATA
GATGGAAATTTAGTTCCCCCTGGTGCTCTGGTTACCTTTCTACAAAAGGGAATTCAATAT
CTTGAATTGGAAGCAAATTTGAGCAATGATGACACAGATACGGATGAAGACTTCCAGTTT
TTACAACCCATTGATCTTATCACGAAGGATGTATATGAGCTGCAAAAAATAATAAAAGAA
AAAAAGGAAAAGCTTCGGCAAGATAAGCCTAGGGGAAAAGACAAGGATAACAATGTCCAT
GAGAGGGAGCATGGACGAGAACCTGCTAGAGAAAGGGAGAAGGAAAAACAATTGAAGGAA
AAAGAGCAAGATCGAGATCGAGAGAGAGAGAAAATTGAGAAGGATAAGGAGAGAGAGAAA
AATAAGGACAAAGAAAAACCACGCGAGGATCCCATGGACGTGAAAGCCAATGGAGATAAA
GATGTTGTCACGCATGAGGAGAATGGAAAGGCTGCTGATCCGGAGCCAATGGAGGTTTGC
ACAAGCTCTACCTCGCTGCCATGTGAAATCCCGAGTTCTGATGTACTGGTTTTGGATGGG
CATACATCCGAGGTCTTTGCATGTGCCTGGAGTCCAGACGGTTCACTTCTTGCATCTGGG
TCTGGAGATTCTACTGCTAGAATTTGGACAATTGGAGATGGTCCTTGTCATTCTCGTATG
CAAAATGGGCCTGTAAATGTCATGGTATTGAAGCATTTTAAAGGTCGAACAAACGAGAAA
AGCAAGGATGTCACAACACTCGAGTGGAATGGCGAGGGAAACCTACTAGCAACGGGTTCT
TATGATGGTCAAGCTAGAATCTGGAACCGAGATGTANCTCTTGATGTTGATTGGCGAAAC
AACAATTCCTTTGCAACCTGCTCCACTGATAACATGATTTATGTTTGTAAAGTTGGAGAG
AGTCGGCCTGTCAAAACTTTTTCGGGGCATCAGAGTGAAGTCAATGCAATCAAGTGGGAC
CCCTCAGGCTCCTTGTTGGCATCGTGCTCTGATGACACCACGGCTAAGATATGGAGCGTG
AAACAAGATGCCTGCGTGCATGATTTCAAAGAACATGCCAAGGAGATCTATACCATCAGA
TGGAGTCCAACAGGCCCTGGTACGAGCAACCCAAATCAACAGTTGTTGCTGGCCAGTGCC
TCTTTTGACTCCACAGTGAAGCTATGGGATGTAGAACTTGGCCGTCTCCTTCACAGTCTG
AATGGCCATAGGGATCCCGTTTATTCTGTTGCATTTAGCCCAAACAGCGAGTACTTGGCA
ACCGGGTCATTGGATAGATGCTTGAACATATGGTCTGTGAAAGAGGCCAAGATCATAAAA
ACTTACAGTGGAAATGGTGGAATCTTTGAAGTGTGCTGGAACAAGGAAGGCAACAAGGTT
GCAGCTTGTTTTGCGGACAATGTGGTCTGTGTCTTTGATGTTCGGATATAG

Peptide Sequence

PEP ID

XP_016465677.1
PEP Infomation

PREDICTED: F-box-like/WD repeat-containing protein TBL1X [Nicotiana tabacum]
Sequence

MISITSSELNYLVFRYLQESGFTHSAFALGYEAGINKSTIDGNLVPPGALVTFLQKGIQY
LELEANLSNDDTDTDEDFQFLQPIDLITKDVYELQKIIKEKKEKLRQDKPRGKDKDNNVH
EREHGREPAREREKEKQLKEKEQDRDREREKIEKDKEREKNKDKEKPREDPMDVKANGDK
DVVTHEENGKAADPEPMEVCTSSTSLPCEIPSSDVLVLDGHTSEVFACAWSPDGSLLASG
SGDSTARIWTIGDGPCHSRMQNGPVNVMVLKHFKGRTNEKSKDVTTLEWNGEGNLLATGS
YDGQARIWNRDVXLDVDWRNNNSFATCSTDNMIYVCKVGESRPVKTFSGHQSEVNAIKWD
PSGSLLASCSDDTTAKIWSVKQDACVHDFKEHAKEIYTIRWSPTGPGTSNPNQQLLLASA
SFDSTVKLWDVELGRLLHSLNGHRDPVYSVAFSPNSEYLATGSLDRCLNIWSVKEAKIIK
TYSGNGGIFEVCWNKEGNKVAACFADNVVCVFDVRI

Transcript Sequence

Gene sequence data has not been registered.